Gene Expression across Normal and Tumor tissue Home | Document | SiteMap   
Gene Expression across Normal and Tumor tissue
 
 
 
 
 
Menu Contents
 • Overview
  - Introduction
- DB description
- Method
- Outlier detection
- Analysis of
   Laboratory Effects

- Disclaimers
 • Search
 • Analysis
  - ERBB2 (HER2)
- EGFR
 • Inforamation
- Cancer Gene
- Cancer Cell Line
 • Reference

  Reference
 
 
 
1.   Gautier, L., et al. (2004) affy--analysis of Affymetrix GeneChip data at the probe level, Bioinformatics, 20, 307-315.
2.

  Kapushesky, M., et al. (2010) Gene expression atlas at the European bioinformatics institute, Nucleic Acids Res, 38, D690-698.

3.   Kilpinen, S., et al. (2008) Systematic bioinformatic analysis of expression levels of 17,330 human genes across 9,783 samples from 175 types of healthy and pathological tissues, Genome Biol, 9, R139.
4.   Lukk, M., et al. (2010) A global map of human gene expression, Nat Biotechnol, 28, 322-324.
5.

  Petrelli, N.J., et al. (2009) Clinical Cancer Advances 2009: major research advances in cancer treatment, prevention, and screening--a report from the American Society of Clinical Oncology, J Clin Oncol, 27, 6052-6069.

6.   Rhodes, D.R., et al. (2009) AGTR1 overexpression defines a subset of breast cancer and confers sensitivity to losartan, an AGTR1 antagonist, Proc Natl Acad Sci U S A, 106, 10284-10289.
7.   Stuart, D. and Sellers, W.R. (2009) Linking somatic genetic alterations in cancer to therapeutics, Curr Opin Cell Biol, 21, 304-310.
8.   Weinstein, I.B. and Joe, A. (2008) Oncogene addiction, Cancer Res, 68, 3077-3080; discussion 3080.
9.   Zilliox, M.J. and Irizarry, R.A. (2007) A gene expression bar code for microarray data, Nat Methods, 4, 911-913.
Data Summary
 • Data sets
  - U133Plus2 : 306
- U133A : 241
 • Samples
  - U133Plus2 : 24,300
- U133A : 16,400
 • Probes
  - U133Plus2 : 54,613
- U133A : 22,215
 
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